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Phatr11337 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11337" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11337Predicted protein (319 aa)    
Predicted Functional Partners:
Phatr9576
Predicted protein (254 aa)
       
 
  0.740
Phatr45621
Predicted protein (426 aa)
       
      0.483
Phatr47058
Predicted protein (606 aa)
     
 
  0.479
Phatr8270
Predicted protein (84 aa)
       
 
  0.476
Phatr8269
Predicted protein (77 aa)
       
 
  0.476
Phatr46145
Predicted protein (393 aa)
       
 
  0.476
Phatr16633
Predicted protein (81 aa)
       
 
  0.476
Phatr23959
Predicted protein; Binds the poly(A) tail of mRNA (605 aa)
     
 
  0.423
Phatr9829
Predicted protein (181 aa)
           
  0.416
Phatr44459
Predicted protein (203 aa)
           
  0.416
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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