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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr11358 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11358" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11358Predicted protein (184 aa)    
Predicted Functional Partners:
Phatr28723
Predicted protein (175 aa)
     
   
  0.909
Phatr24408
N-acetyl transferase (198 aa)
     
   
  0.909
Phatr47883
Predicted protein (1054 aa)
           
  0.897
Phatr40101
Predicted protein (673 aa)
           
  0.871
Phatr11710
Predicted protein (143 aa)
     
   
  0.765
Phatr10595
Predicted protein (192 aa)
     
   
  0.765
Phatr51345
Histone acetyltransferase (149 aa)
     
   
  0.757
Phatr14339
annotation not available (174 aa)
     
   
  0.757
Phatr48534
Predicted protein (1026 aa)
       
      0.741
Phatr21420
Predicted protein (743 aa)
           
  0.618
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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