STRINGSTRING
Phatr11363 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11363" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11363Predicted protein (213 aa)    
Predicted Functional Partners:
Phatr55230
Predicted protein (709 aa)
     
  0.872
HSP90
Heat shock protein Hsp90 (780 aa)
     
  0.872
Phatr18793
Predicted protein (750 aa)
     
  0.872
Phatr16786
Predicted protein (716 aa)
     
  0.851
Skp1_3
S-phase kinase-associated protein (158 aa)
       
 
  0.660
Skp1;2
Predicted protein (175 aa)
       
 
  0.660
Skp1_1
Predicted protein (169 aa)
       
 
  0.660
Phatr49666
Predicted protein (540 aa)
       
 
  0.635
Phatr47992
Predicted protein (432 aa)
       
 
  0.635
Phatr43724
Predicted protein (890 aa)
       
 
  0.635
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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