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Phatr11527 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11527" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11527Predicted protein (172 aa)    
Predicted Functional Partners:
Phatr41702
Predicted protein (671 aa)
 
  0.998
Phatr34747
N-(5’-phosphoribosyl)anthranilate isomerase (297 aa)
 
  0.992
Phatr17238
Anthranilate synthase (958 aa)
  0.983
Phatrdraft1682
Anthranilate synthase (927 aa)
 
  0.975
TRPB
Tryptophan synthase, beta chain (385 aa)
 
  0.957
Phatrdraft595
Predicted protein (233 aa)
 
  0.954
Phatrdraft592
Predicted protein (340 aa)
 
  0.906
Phatr28937
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
 
 
  0.902
Phatr14230
Anthranilate phosphoribosyltransferasePredicted protein (357 aa)
 
 
  0.902
Phatr19324
Predicted protein (554 aa)
   
   
  0.804
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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