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STRINGSTRING
PHATR_1155 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_1155" - Proline dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_1155Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate (509 aa)    
Predicted Functional Partners:
Phatr31906
Aldehyde dehydrogenase (551 aa)
   
  0.945
Phatr25379
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family (289 aa)
   
  0.922
Phatr35643
Predicted protein (337 aa)
       
  0.920
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
         
  0.920
Phatr18027
Predicted protein (706 aa)
         
  0.920
Phatr55162
Predicted protein (437 aa)
         
    0.900
Phatr5156
Predicted protein (188 aa)
         
    0.900
Phatr4950
Predicted protein (193 aa)
         
    0.900
Phatr48891
Uncharacterized protein (427 aa)
         
    0.900
Phatr38694
Predicted protein (348 aa)
         
    0.900
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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