STRINGSTRING
Phatr11792 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11792" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11792Predicted protein (278 aa)    
Predicted Functional Partners:
Phatr8301
Predicted protein (80 aa)
   
        0.680
Phatr8310
Predicted protein (77 aa)
   
        0.677
Phatr48524
Predicted protein (300 aa)
   
        0.673
Phatr44529
Predicted protein (360 aa)
   
        0.651
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
        0.599
Phatr46071
Predicted protein (180 aa)
   
        0.594
Phatr15980
Predicted protein (119 aa)
   
        0.555
Phatr7784
Predicted protein (79 aa)
   
        0.551
Phatr14996
Predicted protein (85 aa)
   
        0.550
Phatr48122
Predicted protein (366 aa)
   
        0.550
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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