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Phatr11850 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11850" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11850Predicted protein (285 aa)    
Predicted Functional Partners:
Phatrdraft1425
Predicted protein (357 aa)
         
  0.870
Phatr16162
Predicted protein (284 aa)
   
   
 
0.826
Phatr47120
Predicted protein (748 aa)
         
    0.800
Phatr11703
Predicted protein (820 aa)
     
        0.797
Phatr42570
Predicted protein (1267 aa)
     
        0.661
Phatr46837
Predicted protein (997 aa)
     
        0.658
Phatr42495
Predicted protein (1233 aa)
     
        0.657
Phatr9235
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1147 aa)
     
   
  0.650
Phatr29606
Predicted protein (330 aa)
     
      0.638
Phatr32036
Predicted protein (801 aa)
     
        0.612
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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