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STRINGSTRING
PGAM_7 protein (Phaeodactylum tricornutum) - STRING interaction network
"PGAM_7" - Phosphoglycerate mutase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PGAM_7Phosphoglycerate mutase (229 aa)    
Predicted Functional Partners:
TPI/GapC3
Triosephosphate isomerase/glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family (614 aa)
   
 
  0.838
GapC1
Glyceraldehyde-3-phosphate dehydrogenase (379 aa)
     
 
  0.629
Phatrdraft1572
Predicted protein; Enolase (464 aa)
   
 
  0.520
Phatrdraft1192
annotation not available (457 aa)
   
 
  0.520
Phatr41515
Enolase (437 aa)
   
 
  0.520
PDH1
Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits (325 aa)
     
   
  0.491
PMM1
Phosphomannomutase; Involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions (249 aa)
     
 
  0.474
FbaC5
Fructose-bisphosphate aldolase (358 aa)
   
 
  0.468
PGK
Phosphoglycerate kinase (448 aa)
     
 
  0.451
Phatr29157
Phosphoglycerate kinase (441 aa)
     
 
  0.451
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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