STRINGSTRING
Phatr11965 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr11965" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr11965Predicted protein (194 aa)    
Predicted Functional Partners:
Phatr36743
Predicted protein (149 aa)
   
  0.998
Phatr19552
Predicted protein (529 aa)
   
 
  0.993
Phatr45356
Predicted protein (479 aa)
     
 
  0.992
Phatr48920
Predicted protein (317 aa)
   
 
  0.991
Phatr7349
Predicted protein (87 aa)
     
  0.990
Phatr9197
Predicted protein (64 aa)
     
  0.976
Phatr9983
Predicted protein (123 aa)
   
  0.964
Phatr18579
Predicted protein (510 aa)
   
 
  0.952
Phatr12144
Predicted protein (220 aa)
   
 
  0.935
Phatr2182
Predicted protein (360 aa)
   
 
  0.934
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (8%) [HD]