STRINGSTRING
Phatr12113 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr12113" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr12113Predicted protein (284 aa)    
Predicted Functional Partners:
Phatr43830
Vacuolar protein sorting-associated protein 35 (1712 aa)
     
  0.991
Phatr17936
Predicted protein (206 aa)
     
  0.986
Phatr45401
Predicted protein (830 aa)
     
  0.959
Phatr3137
Predicted protein (392 aa)
     
  0.959
Rab7
Predicted protein (237 aa)
     
 
  0.671
Phatr40171
Predicted protein (364 aa)
     
 
  0.671
Phatr44534
Predicted protein (417 aa)
     
 
  0.638
Phatr55114
Predicted protein (617 aa)
     
 
  0.515
Phatr38893
Predicted protein (174 aa)
       
 
  0.496
MCM7
Predicted protein (618 aa)
     
      0.458
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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