STRINGSTRING
FtrB protein (Phaeodactylum tricornutum) - STRING interaction network
"FtrB" - Reductase of ferredoxin thioredoxin reductase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FtrBReductase of ferredoxin thioredoxin reductase (121 aa)    
Predicted Functional Partners:
Phatr14307
Predicted protein (90 aa)
   
 
 
  0.778
Phatr7660
Predicted protein (88 aa)
       
      0.640
Phatr47958
Predicted protein (312 aa)
     
 
  0.619
Phatrdraft1610
Predicted protein (279 aa)
       
 
  0.596
Phatrdraft1259
Predicted protein (279 aa)
       
 
  0.596
Phatr7342
Predicted protein (106 aa)
       
 
  0.596
Phatr14478
Predicted protein (112 aa)
       
 
  0.596
Phatr37959
Predicted protein (311 aa)
   
        0.559
Phatr44529
Predicted protein (360 aa)
   
        0.524
Phatr16334
Predicted protein (223 aa)
   
        0.523
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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