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Phatr12267 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr12267" - Uracil-DNA glycosylase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr12267Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine (227 aa)    
Predicted Functional Partners:
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
   
 
  0.947
Phatr1690
Predicted protein (495 aa)
   
 
  0.841
Phatr47361
Predicted protein (489 aa)
     
  0.675
Phatr43711
Predicted protein (580 aa)
     
  0.675
PheRS
Phenylalanyl-trna synthetase class IIc family protein (405 aa)
     
 
  0.672
PHATR_7646
Predicted protein (137 aa)
   
 
  0.664
RPA2
Predicted protein (270 aa)
     
 
  0.661
DDB1
Damage-specific DNA binding protein 1 (1284 aa)
       
 
  0.645
Phatr2087
Thymidylate synthase (217 aa)
   
 
  0.635
POLA
DNA polymerase (1147 aa)
     
   
  0.621
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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