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STRINGSTRING
Phatr12269 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr12269" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr12269Predicted protein (300 aa)    
Predicted Functional Partners:
Phatr9634
Predicted protein (480 aa)
   
   
  0.911
Phatr38985
Ubiquinone biosynthesis protein COQ4 homolog, mitochondrial; Component of the coenzyme Q biosynthetic pathway. May play a role in organizing a multi-subunit COQ enzyme complex required for coenzyme Q biosynthesis. Required for steady-state levels of other COQ polypeptides; Belongs to the COQ4 family (254 aa)
     
   
  0.910
Phatr35064
Predicted protein (348 aa)
     
   
  0.910
Phatr32550
Predicted protein (393 aa)
   
   
  0.909
Phatr42245
Predicted protein (575 aa)
     
   
  0.892
Phatr31683
Predicted protein (426 aa)
   
 
  0.870
Phatr16283
Predicted protein (249 aa)
   
   
  0.840
Phatr49325
Predicted protein; Belongs to the FPP/GGPP synthase family (343 aa)
   
   
  0.821
Phatr44670
Predicted protein (317 aa)
   
   
  0.811
MPDC
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes (415 aa)
   
   
  0.794
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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