STRINGSTRING
Phatr12373 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr12373" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr12373Predicted protein (224 aa)    
Predicted Functional Partners:
Phatr17860
Predicted protein (253 aa)
  0.998
Phatr31367
Predicted protein (819 aa)
   
 
  0.956
FAO1
Peroxisomal bifunctional enzyme (767 aa)
   
  0.914
Phatr35240
Predicted protein (684 aa)
   
  0.914
Phatr42245
Predicted protein (575 aa)
 
 
  0.881
ACD1
Short chain acyl-coenzyme A dehydrogenase (436 aa)
  0.804
Phatr55192
Hydratase enyol-coa hydratase (269 aa)
   
  0.753
Phatr20310
Predicted protein (434 aa)
 
  0.744
Phatr31683
Predicted protein (426 aa)
   
 
  0.739
Phatr10617
Predicted protein (229 aa)
 
 
   
  0.721
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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