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PDH1 protein (Phaeodactylum tricornutum) - STRING interaction network
"PDH1" - Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDH1Precursor of dehydrogenase pyruvate dehydrogenase E1, alpha and beta subunits (325 aa)    
Predicted Functional Partners:
Phatr20360
Annotation not available (318 aa)
  0.998
PDHB1
Precursor of dehydrogenase pyruvate dehydrogenase E1 component beta subunit (360 aa)
  0.997
Phatr11021
Predicted protein (323 aa)
  0.985
DHLTA_3
Dihydrolipoamide acetyl transferase (477 aa)
 
  0.973
Phatrdraft1828
Predicted protein (477 aa)
 
  0.973
DHLTA_1
Dihydrolipoamide acetyltransferase (492 aa)
 
  0.971
DHLTA_2
Dihydrolipoamide acetyl transferase (435 aa)
 
  0.971
Phatr38009
Predicted protein (230 aa)
 
  0.970
DHLTA_4
Dihydrolipoamide acetyl transferase (525 aa)
   
  0.920
Phatr40430
Dihydrolipoamide succinyltransferase (377 aa)
   
  0.920
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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