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hUfd2 protein (Phaeodactylum tricornutum) - STRING interaction network
"hUfd2" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hUfd2Predicted protein (82 aa)    
Predicted Functional Partners:
Phatr42625
Predicted protein (724 aa)
     
 
  0.873
hNpl4
Predicted protein (473 aa)
     
 
  0.823
sUbi
Ubiquitin-like protein (268 aa)
     
  0.809
hUbi
Predicted proteinUbiquitin extension protein 4 (381 aa)
     
  0.809
Phatr49037
Predicted protein (205 aa)
     
  0.809
Phatr8950
Predicted protein (252 aa)
     
 
  0.803
Phatr8754
Predicted protein (165 aa)
     
 
  0.803
Phatr55229
Predicted protein (379 aa)
     
 
  0.803
hCdc48
Predicted protein (800 aa)
     
 
  0.803
Phatr4937
Predicted protein (217 aa)
     
 
  0.803
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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