STRINGSTRING
Phatr12588 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr12588" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr12588Predicted protein (207 aa)    
Predicted Functional Partners:
Phatr5851
Predicted protein (193 aa)
         
    0.800
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
       
 
  0.482
Phatr9283
Predicted protein (623 aa)
       
 
  0.477
Phatr45758
Nadph-cytochrome P450 reductase (753 aa)
       
 
  0.477
Phatr42018
Ferredoxin--NADP reductase (320 aa)
       
 
  0.477
Phatr23717
Ferredoxin--NADP reductase (340 aa)
       
 
  0.477
Phatr15777
Ferredoxin--NADP reductase (299 aa)
       
 
  0.477
Phatr12813
Ferredoxin--NADP reductase (298 aa)
       
 
  0.477
Phatr49656
Predicted protein (399 aa)
       
 
  0.426
Phatr27240
Predicted protein (746 aa)
       
 
  0.407
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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