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CDC20_1 protein (Phaeodactylum tricornutum) - STRING interaction network
"CDC20_1" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CDC20_1Predicted protein (363 aa)    
Predicted Functional Partners:
APC6
Predicted protein (381 aa)
     
  0.878
Phatr45431
Predicted protein (1158 aa)
     
  0.848
APC10
Predicted protein (148 aa)
     
  0.840
APC8
Predicted protein (648 aa)
     
  0.821
APC3
Predicted protein (336 aa)
     
  0.821
APC7
Predicted protein (572 aa)
     
  0.796
RPN7
Regulatory proteasome non-atpase subunit 7 (330 aa)
       
    0.750
APC2
Predicted protein (767 aa)
     
    0.750
Phatr32412
Annotation not available (800 aa)
     
  0.725
CDKA2
Predicted protein (298 aa)
     
  0.712
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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