STRINGSTRING
Phatr13095 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13095" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13095Predicted protein (97 aa)    
Predicted Functional Partners:
Phatr8451
Predicted protein (76 aa)
   
0.966
Phatr47826
Predicted protein (777 aa)
     
  0.803
Phatr12234
GABAR1 G protein-coupled GABA receptor (421 aa)
     
  0.803
Phatr47943
Predicted protein (1167 aa)
     
  0.800
Phatr44298
Predicted protein (1736 aa)
     
  0.800
Phatr8269
Predicted protein (77 aa)
   
  0.775
Phatr8270
Predicted protein (84 aa)
   
  0.771
Phatr16633
Predicted protein (81 aa)
   
  0.765
Phatr11308
Predicted protein (89 aa)
   
  0.733
Phatrdraft286
Predicted protein (104 aa)
   
  0.725
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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