STRINGSTRING
Phatr13174 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13174" - L-ascorbate peroxidase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13174L-ascorbate peroxidase (277 aa)    
Predicted Functional Partners:
Phatr23292
L-galactono-1,4-lactone dehydrogenase (572 aa)
         
  0.902
Phatr20948
Predicted protein; Electron carrier protein. The oxidized form of the cytochrome c heme group can accept an electron from the heme group of the cytochrome c1 subunit of cytochrome reductase. Cytochrome c then transfers this electron to the cytochrome oxidase complex, the final protein carrier in the mitochondrial electron-transport chain (104 aa)
     
 
  0.892
Phatr47395
Predicted protein (331 aa)
   
   
0.814
Phatr46616
L-ascorbate peroxidase (327 aa)
         
0.802
SOD2
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (226 aa)
       
  0.611
SOD1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (216 aa)
       
  0.611
Phatr45431
Predicted protein (1158 aa)
     
 
  0.559
Phatr15852
Predicted protein (138 aa)
       
  0.550
Trx-f
Thioredoxin f (107 aa)
       
 
  0.540
Trx-h2
Thioredoxin h (109 aa)
       
 
  0.540
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%) [HD]