STRINGSTRING
Phatr13192 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13192" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13192Predicted protein (74 aa)    
Predicted Functional Partners:
Phatr13053
Predicted protein (725 aa)
     
  0.993
Phatr20135
Predicted protein (690 aa)
     
  0.993
Phatr11593
Predicted protein (324 aa)
     
  0.993
Phatrdraft1638
Predicted protein (548 aa)
     
  0.991
Phatr28285
Predicted protein (553 aa)
     
  0.991
Phatr34280
Predicted protein (238 aa)
     
  0.991
Phatr16704
Predicted protein (1045 aa)
     
  0.991
Phatr19982
Predicted protein (2347 aa)
     
  0.990
Phatr54743
Predicted protein (347 aa)
     
  0.990
Phatr26061
Predicted protein (552 aa)
     
  0.990
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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