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Phatr13232 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13232" - Proline dehydrogenase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13232Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate (505 aa)    
Predicted Functional Partners:
P5CS
Delta-1-pyrroline-5-carboxylate synthase; Delta l-pyrroline-5-carboxylate synthetase; In the C-terminal section; belongs to the gamma- glutamyl phosphate reductase family (747 aa)
         
  0.920
Phatr18027
Predicted protein (706 aa)
         
  0.920
Phatr50034
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen (547 aa)
   
   
  0.804
Phatr22418
Catalase; Occurs in almost all aerobically respiring organisms and serves to protect cells from the toxic effects of hydrogen peroxide (566 aa)
           
  0.739
Phatr38509
Arginase; Belongs to the arginase family (301 aa)
   
   
  0.736
Phatr40880
Agmatinase; Belongs to the arginase family (416 aa)
   
   
  0.720
Phatr21116
Predicted protein; Argininosuccinate synthase (418 aa)
     
   
  0.655
Phatr34526
Predicted protein (440 aa)
     
   
  0.634
Phatr17427
Predicted protein (695 aa)
     
   
  0.630
Phatr25379
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family (289 aa)
   
 
  0.629
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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