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STRINGSTRING
Phatr13309 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13309" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13309Predicted protein (182 aa)    
Predicted Functional Partners:
Phatr8457
Predicted protein (59 aa)
     
      0.536
Phatr27905
Predicted protein (418 aa)
     
      0.487
Phatr8842
Predicted protein (379 aa)
     
   
  0.487
Phatr16688
Predicted protein (414 aa)
     
 
  0.477
Phatr30960
Protein MAK16 homolog; Belongs to the MAK16 family (313 aa)
     
      0.460
Phatr21557
Predicted protein (348 aa)
     
   
  0.445
Phatr44394
Predicted protein (668 aa)
     
      0.443
Phatr47058
Predicted protein (606 aa)
     
      0.441
Phatr51007
Predicted protein (296 aa)
     
        0.441
Phatr36927
Predicted protein (409 aa)
     
      0.440
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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