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STRINGSTRING
Phatr13333 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13333" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13333Predicted protein (284 aa)    
Predicted Functional Partners:
Phatr1690
Predicted protein (495 aa)
     
 
  0.981
Phatr48414
Predicted protein (593 aa)
         
  0.960
GDCH
Glycine cleavage system H protein; The H protein shuttles the methylamine group of glycine from the P protein to the T protein; Belongs to the GcvH family (157 aa)
     
   
  0.799
Phatr47685
Predicted protein (598 aa)
           
  0.624
Phatr41746
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family (345 aa)
           
  0.582
Phatr47067
Predicted protein (1237 aa)
     
   
  0.545
Phatr23429
Predicted protein (615 aa)
     
   
  0.512
Phatr1840
Predicted protein (503 aa)
     
   
  0.452
Phatr46479
Translation initiation factor eif-2bgamma (758 aa)
           
  0.436
Phatr30471
Predicted protein; Methylenetetrahydrofolate reductase (376 aa)
           
  0.412
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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