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PHATR_1682 protein (Phaeodactylum tricornutum) - STRING interaction network
"PHATR_1682" - Anthranilate synthase. anthranilate synthetase. chorismate lyase in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PHATR_1682Anthranilate synthase. anthranilate synthetase. chorismate lyase (439 aa)    
Predicted Functional Partners:
Phatr45871
Predicted protein (944 aa)
     
  0.993
Phatr25666
Predicted protein (885 aa)
     
  0.993
Phatr11703
Predicted protein (820 aa)
     
  0.993
Phatr42495
Predicted protein (1233 aa)
     
  0.993
Phatr43713
Predicted protein (609 aa)
     
  0.993
Phatr18258
Predicted protein (743 aa)
     
  0.993
Phatr17974
Predicted protein (475 aa)
     
 
  0.979
Phatr15481
Predicted protein (482 aa)
     
 
  0.979
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
 
  0.979
Phatr44242
Predicted protein (890 aa)
     
  0.974
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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