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Phatr13470 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13470" - Ribonuclease in Phaeodactylum tricornutum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13470Ribonuclease; Endonuclease that specifically degrades the RNA of RNA- DNA hybrids (194 aa)    
Predicted Functional Partners:
Phatr1690
Predicted protein (495 aa)
   
   
  0.863
PheRS
Phenylalanyl-trna synthetase class IIc family protein (405 aa)
   
   
  0.693
Phatr54992
DNA primase (458 aa)
   
   
  0.686
PHATR_7646
Predicted protein (137 aa)
   
        0.643
PCNA
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (260 aa)
     
 
  0.631
Phatr2087
Thymidylate synthase (217 aa)
   
   
  0.620
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
   
 
  0.618
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
   
 
  0.618
ACL
Atp-citrate synthase (1082 aa)
         
  0.610
Phatr48911
Predicted protein (631 aa)
       
  0.579
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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