STRINGSTRING
Phatr13526 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13526" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13526Predicted protein (321 aa)    
Predicted Functional Partners:
Phatr45989
Predicted protein (1008 aa)
     
  0.990
Phatrdraft1638
Predicted protein (548 aa)
     
  0.990
Phatr54743
Predicted protein (347 aa)
 
 
0.987
Phatr13192
Predicted protein (74 aa)
     
    0.985
Phatr34712
Predicted protein (662 aa)
     
    0.983
Phatr19982
Predicted protein (2347 aa)
     
  0.980
Phatr35766
Predicted protein (828 aa)
     
  0.976
Phatr12309
Predicted protein (134 aa)
     
  0.973
Phatr20135
Predicted protein (690 aa)
     
    0.972
Phatr35063
Predicted protein (165 aa)
     
  0.966
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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