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STRINGSTRING
Phatr13549 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13549" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13549Predicted protein (197 aa)    
Predicted Functional Partners:
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
     
   
  0.893
Phatrdraft1666
GPI mannosyltransferase 2; Mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis (558 aa)
           
  0.877
Phatr47390
Predicted protein (668 aa)
     
   
  0.862
Phatr13741
Predicted protein (147 aa)
     
   
  0.811
Phatr30638
Predicted protein (294 aa)
     
   
  0.806
Phatr10976
Mannosyltransferase (370 aa)
     
   
  0.790
Phatr52551
Predicted protein (600 aa)
           
  0.770
Phatr51897
Predicted protein (531 aa)
           
  0.767
Phatr10862
annotation not available (309 aa)
           
  0.764
Phatr44117
Alpha-1,3-glucosyltransferase; Dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase; Belongs to the ALG6/ALG8 glucosyltransferase family (532 aa)
     
   
  0.733
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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