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Phatr13581 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13581" - DNA topoisomerase 2 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13581DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)    
Predicted Functional Partners:
Phatr13384
Predicted protein (594 aa)
     
 
  0.816
Phatr44165
Structural maintenance of chromosomes protein (1356 aa)
   
 
  0.815
SMC2
Structural maintenance of chromosomes protein (1213 aa)
   
 
  0.805
Phatr1690
Predicted protein (495 aa)
   
   
  0.790
SMC3
Predicted protein (1232 aa)
   
 
  0.744
Phatr36284
Predicted protein (924 aa)
     
 
  0.743
Phatr48451
Separase protein (2039 aa)
     
 
  0.740
SMC6
Predicted protein (220 aa)
   
 
  0.652
Pt-KIF3
Kinesin family-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family (953 aa)
     
   
  0.642
Phatr41702
Predicted protein (671 aa)
         
  0.641
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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