STRINGSTRING
Phatr13725 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13725" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13725Predicted protein (397 aa)    
Predicted Functional Partners:
Phatr9348
Predicted protein (172 aa)
            0.598
Phatr22113
Bifunctional aspartokinase (870 aa)
   
   
  0.479
Phatr34582
Predicted protein (334 aa)
       
  0.438
Phatr29702
Predicted protein (878 aa)
   
   
  0.430
Phatr47067
Predicted protein (1237 aa)
         
  0.411
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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