STRINGSTRING
Phatr13820 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13820" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13820Predicted protein (282 aa)    
Predicted Functional Partners:
Phatr6258
Predicted protein (205 aa)
     
  0.995
Phatr46837
Predicted protein (997 aa)
     
  0.992
Phatr9929
Predicted protein (196 aa)
     
  0.992
Phatr45888
Predicted protein (590 aa)
     
  0.992
Phatr43713
Predicted protein (609 aa)
     
  0.990
Phatr45871
Predicted protein (944 aa)
     
  0.990
Phatr18258
Predicted protein (743 aa)
     
  0.989
Phatr3351
Predicted protein (281 aa)
     
 
  0.988
Phatr19122
Predicted protein (322 aa)
     
 
  0.988
Phatr46516
Predicted protein (1051 aa)
     
 
  0.985
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (4%) [HD]