STRINGSTRING
CSN4 protein (Phaeodactylum tricornutum) - STRING interaction network
"CSN4" - COP9 SigNalosome subunit 4 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSN4COP9 SigNalosome subunit 4 (265 aa)    
Predicted Functional Partners:
CSN2
COP9 SigNalosome subunit 2 (404 aa)
     
  0.991
CSN5
COP9 SigNalosome subunit 5 (370 aa)
     
  0.988
CSN7
COP9 SigNalosome subunit 7 (295 aa)
     
  0.986
CUL1_2
CULlin protein 4 (821 aa)
     
  0.958
CSN1
COP9 SigNalosome subunit 1 (524 aa)
     
  0.943
RPN6
Regulatory proteasome non-atpase subunit 6 (405 aa)
     
  0.937
RPN11
Regulatory proteasome non-atpase subunit 11 (311 aa)
     
  0.859
RPN8
Regulatory proteasome non-atpase subunit 8 (334 aa)
     
  0.859
CSN6
COP9 SigNalosome subunit 6 (280 aa)
     
  0.859
Phatr36569
Predicted protein (166 aa)
     
  0.761
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (11%) [HD]