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CSN4 protein (Phaeodactylum tricornutum) - STRING interaction network
"CSN4" - COP9 SigNalosome subunit 4 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CSN4COP9 SigNalosome subunit 4 (265 aa)    
Predicted Functional Partners:
CSN5
COP9 SigNalosome subunit 5 (370 aa)
     
 
  0.998
CSN3
COP9 SigNalosome subunit 3 (566 aa)
     
 
  0.995
Phatr46122
Predicted protein (312 aa)
     
 
  0.995
CSN1
COP9 SigNalosome subunit 1 (524 aa)
     
 
  0.995
CSN2
COP9 SigNalosome subunit 2 (404 aa)
     
 
  0.995
CSN6
COP9 SigNalosome subunit 6; Belongs to the eIF-3 subunit F family (280 aa)
     
 
  0.956
CUL1_2
CULlin protein 4; Belongs to the cullin family (821 aa)
     
 
  0.931
Phatr47027
Eukaryotic translation initiation factor 3 subunit M; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation (400 aa)
     
 
  0.878
RPN5
Regulatory proteasome non-atpase subunit 5 (457 aa)
     
   
  0.876
DDB1
Damage-specific DNA binding protein 1 (1284 aa)
     
 
  0.829
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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