STRINGSTRING
Phatr13895 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13895" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13895Predicted protein (330 aa)    
Predicted Functional Partners:
Phatr48359
Predicted protein (218 aa)
   
   
  0.612
Phatr9078
Predicted protein (105 aa)
   
   
  0.580
Phatr11022
Predicted protein (366 aa)
   
   
  0.578
Phatr11313
Predicted protein (131 aa)
   
        0.569
Phatr48524
Predicted protein (300 aa)
   
        0.567
Phatr44899
Predicted protein (288 aa)
   
     
  0.554
Phatr43556
Predicted protein (249 aa)
   
        0.553
Phatr15371
Predicted protein (141 aa)
   
        0.548
PsbO
Oxygen-evolving enhancer protein 1 (308 aa)
   
   
  0.545
Phatr16606
Predicted protein (130 aa)
 
   
  0.531
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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