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Phatr13994 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr13994" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr13994Predicted protein (336 aa)    
Predicted Functional Partners:
ACL
Atp-citrate synthase (1082 aa)
   
   
  0.472
Phatr23557
Predicted protein (395 aa)
         
  0.431
Phatrdraft1621
Predicted protein (431 aa)
   
   
  0.428
Phatr48518
Predicted protein (373 aa)
   
   
  0.428
Phatr42755
Predicted protein (391 aa)
   
   
  0.428
Phatr42479
Predicted protein (391 aa)
   
   
  0.428
ACC2
Biotin carboxylase (2282 aa)
         
  0.409
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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