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Phatr14002 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14002" - Beta-mannosyltransferase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14002Beta-mannosyltransferase (398 aa)    
Predicted Functional Partners:
Phatr22554
Mannosyltransferase (419 aa)
      
  0.964
DPM1
Dolichyl-phosphate mannosyltransferase (236 aa)
   
  0.960
Phatr9427
Udp-n-acetylglucosamine transferase subunit alg13 (123 aa)
   
 
  0.958
Phatr14444
Udp-n-acetylglucosamine n-acetylglucosaminyltransferase (180 aa)
      
 
  0.954
GMD1
Gdp-mannose 4,6-dehydratase (363 aa)
   
 
  0.880
Phatr19324
Predicted protein (554 aa)
       
  0.727
Phatr34610
N-acetylglucosaminyl phosphatidylinositol deacetylase (267 aa)
   
  0.638
Phatr47245
Predicted protein (480 aa)
   
 
  0.622
Phatr45980
Predicted protein (348 aa)
   
 
  0.622
Phatr45712
Predicted protein (480 aa)
   
 
  0.622
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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