STRINGSTRING
Phatr14068 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14068" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14068Predicted protein (330 aa)    
Predicted Functional Partners:
Phatr36743
Predicted protein (149 aa)
     
      0.749
Phatr20773
Predicted protein (484 aa)
   
      0.715
Phatr11965
Predicted protein (194 aa)
   
      0.715
Phatr7349
Predicted protein (87 aa)
     
      0.648
Phatr8777
Predicted protein (110 aa)
     
        0.580
Phatr10544
Predicted protein (496 aa)
     
   
  0.575
Phatr19647
Predicted protein (354 aa)
     
      0.525
PHATR_1682
Anthranilate synthase. anthranilate synthetase. chorismate lyase (439 aa)
     
        0.521
Phatr12144
Predicted protein (220 aa)
     
        0.521
Phatr13281
Predicted protein; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly (181 aa)
     
        0.519
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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