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STRINGSTRING
Phatr14149 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14149" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14149Predicted protein (239 aa)    
Predicted Functional Partners:
Phatr11894
Predicted protein (209 aa)
     
 
  0.953
Phatr11653
Predicted protein (174 aa)
     
 
  0.936
Phatr8457
Predicted protein (59 aa)
     
 
  0.931
Phatr42302
Predicted protein (289 aa)
     
   
  0.922
Phatr15354
Predicted protein (300 aa)
     
 
  0.906
Phatr30365
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit (677 aa)
 
 
      0.892
Phatr28689
Predicted protein; Belongs to the DEAD box helicase family (453 aa)
     
 
  0.888
Phatr46837
Predicted protein (997 aa)
     
 
  0.886
Phatr31725
Predicted protein (629 aa)
     
   
  0.851
Phatr19647
Predicted protein (354 aa)
     
      0.826
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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