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Phatr14161 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14161" - Helicase_3 in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14161Helicase_3 (540 aa)    
Predicted Functional Partners:
helicase_6
Predicted protein (476 aa)
   
 
0.983
Phatr47058
Predicted protein (606 aa)
     
      0.978
Phatr32036
Predicted protein (801 aa)
     
      0.976
Phatr46516
Predicted protein (1051 aa)
     
      0.966
Phatr10722
Predicted protein (153 aa)
   
 
0.964
Phatr28984
Predicted protein (433 aa)
   
 
0.964
Phatr25666
Predicted protein (885 aa)
     
      0.959
Phatr45828
Predicted protein (805 aa)
     
      0.958
Phatr11703
Predicted protein (820 aa)
     
      0.958
Phatr51897
Predicted protein (531 aa)
     
        0.958
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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