STRINGSTRING
Phatr14176 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14176" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14176Predicted protein (438 aa)    
Predicted Functional Partners:
Phatr48699
Predicted protein (217 aa)
       
 
  0.953
Phatr43574
Predicted protein; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit (499 aa)
     
   
  0.744
Phatr47947
G-protein beta-subunit (501 aa)
     
   
  0.710
Phatr17974
Predicted protein (475 aa)
   
        0.627
Phatr21557
Predicted protein (348 aa)
     
        0.606
Phatr2182
Predicted protein (360 aa)
     
   
  0.564
Phatr43105
Predicted protein (455 aa)
     
 
  0.554
Phatr30365
Predicted protein; Involved in the biogenesis of the 60S ribosomal subunit (677 aa)
     
 
  0.554
Phatr23077
Predicted protein (379 aa)
   
        0.552
Phatr21996
Predicted protein (417 aa)
     
   
  0.543
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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