STRINGSTRING
Phatr14192 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14192" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14192Predicted protein (311 aa)    
Predicted Functional Partners:
Phatr50084
Predicted protein (260 aa)
   
 
  0.888
Phatr14785
Predicted protein (176 aa)
   
 
  0.888
Trx-f
Thioredoxin f (107 aa)
   
 
  0.880
Trx-h2
Thioredoxin h (109 aa)
   
 
  0.880
Phatr14885
Predicted protein (100 aa)
   
 
  0.880
Phatr12104
Predicted protein (106 aa)
   
 
  0.880
Phatr8171
Predicted protein (86 aa)
   
 
  0.844
Trx-m
Thioredoxin m (91 aa)
   
 
  0.844
Trx-y
Thioredoxin y (178 aa)
   
 
  0.844
Phatr14096
Predicted protein (78 aa)
   
 
  0.844
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: medium (77%) [HD]
STRING is part of the ELIXIR infrastructure: it is one of ELIXIR's Core Data Resources.  Learn more >