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hCDK7 protein (Phaeodactylum tricornutum) - STRING interaction network
"hCDK7" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hCDK7Predicted protein (358 aa)    
Predicted Functional Partners:
Phatr9491
Predicted protein (163 aa)
   
0.968
Phatr7634
Predicted protein (103 aa)
       
  0.947
Phatr46490
Predicted protein (268 aa)
       
  0.947
Phatr47992
Predicted protein (432 aa)
       
  0.901
Phatrdraft434
Predicted protein (245 aa)
 
 
  0.870
Phatrdraft137
Predicted protein (245 aa)
 
 
  0.870
PHATR_1103
Predicted protein (386 aa)
 
 
  0.860
PHATR_1875
Predicted protein (353 aa)
 
 
  0.859
PHATR_1864
Predicted protein (405 aa)
 
 
  0.859
Phatr10291
Predicted protein (303 aa)
   
 
  0.849
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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