STRINGSTRING
Phatr14518 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14518" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14518Predicted protein (279 aa)    
Predicted Functional Partners:
Phatr50645
Serine/threonine-protein phosphatase (332 aa)
       
 
  0.826
Phatr18899
Serine/threonine-protein phosphatase (327 aa)
       
 
  0.826
Phatr10628
Predicted protein (575 aa)
       
  0.798
Phatr23164
Predicted protein (489 aa)
   
  0.787
Phatr13360
Predicted protein (226 aa)
     
  0.757
Phatr9576
Predicted protein (254 aa)
       
  0.738
Phatr11777
Serine/threonine-protein phosphatase (309 aa)
     
 
  0.738
Phatr11477
Serine/threonine-protein phosphatase (318 aa)
     
 
  0.738
Phatrdraft1638
Predicted protein (548 aa)
       
  0.733
Phatr20167
Predicted protein (87 aa)
       
    0.731
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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