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Phatr14802 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14802" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14802Predicted protein (110 aa)    
Predicted Functional Partners:
Phatr19901
Predicted protein (900 aa)
       
  0.612
METH
Methionine synthase (1245 aa)
       
  0.594
Phatr31367
Predicted protein (819 aa)
         
  0.592
Phatr9137
Predicted protein (114 aa)
     
  0.563
Phatr20574
Predicted protein (720 aa)
     
      0.491
Phatr48952
Predicted protein (791 aa)
         
  0.467
Phatr47293
Predicted protein (580 aa)
         
  0.461
Phatr9342
Predicted protein (382 aa)
       
  0.453
hUba1
Ubiquitin-activating enzyme E1 (1050 aa)
       
  0.453
UBA1
Ubiquitin-activating enzyme E1, protein 1 (179 aa)
       
  0.453
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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