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DP1 protein (Phaeodactylum tricornutum) - STRING interaction network
"DP1" - E2f-dp in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DP1E2f-dp (182 aa)    
Predicted Functional Partners:
RBR
Predicted protein (1198 aa)
     
  0.980
E2F2
Predicted protein (753 aa)
     
  0.976
E2F1
Predicted protein (394 aa)
     
  0.976
RPN7
Regulatory proteasome non-atpase subunit 7 (330 aa)
       
      0.779
dsCYC1
Predicted protein (330 aa)
     
  0.680
Phatr43757
Cyc-like protein (491 aa)
     
  0.648
dsCYC5
Predicted protein (297 aa)
     
  0.648
CYCA/B_1
Predicted protein (234 aa)
     
  0.648
Phatr52174
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1143 aa)
     
 
  0.628
Phatr13581
DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double-strand breaks (1165 aa)
     
 
  0.628
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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