STRINGSTRING
Phatr14927 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14927" - Predicted protein in Phaeodactylum tricornutum
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14927Predicted protein (87 aa)    
Predicted Functional Partners:
IscU
Iron-sulphur assembly protein isc; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
       
  0.976
IscS
Precursor of desulfurase cysteine desulfurase IscS (400 aa)
       
  0.972
CsdB
Selenocysteine lyase (386 aa)
       
  0.972
Phatr26952
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX (421 aa)
       
  0.940
Phatr20787
Predicted protein (473 aa)
       
  0.717
Hsp70_1
Predicted protein (673 aa)
       
  0.653
Phatr45621
Predicted protein (426 aa)
       
 
  0.643
Phatr45826
Predicted protein (238 aa)
     
 
  0.627
Phatrdraft1610
Predicted protein (279 aa)
     
 
  0.614
Phatrdraft1259
Predicted protein (279 aa)
     
 
  0.614
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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