Full Link:
STRINGSTRING
Phatr14962 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14962" - Cystathionine beta-lyase in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14962Cystathionine beta-lyase (400 aa)    
Predicted Functional Partners:
METH
Methionine synthase (1245 aa)
       
  0.777
Phatr22113
Bifunctional aspartokinase (870 aa)
   
 
  0.769
Phatrdraft542
Cysteine synthase (336 aa)
 
  0.763
Cbs
Predicted protein (469 aa)
 
  0.763
cysK
Cysteine synthase (342 aa)
 
  0.763
Phatr41702
Predicted protein (671 aa)
   
   
  0.755
Phatr30471
Methylenetetrahydrofolate reductase (376 aa)
   
  0.749
Phatr28431
Methylenetetrahydrofolate reductase (634 aa)
   
  0.749
Phatr54915
Eukaryotic cysteine synthase (356 aa)
 
  0.741
Phatrdraft913
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP (386 aa)
   
 
  0.718
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
Server load: low (7%)