STRINGSTRING
Phatr14983 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr14983" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr14983Predicted protein (380 aa)    
Predicted Functional Partners:
Phatr16704
Predicted protein (1045 aa)
     
  0.901
Phatr46169
Predicted protein (520 aa)
     
      0.877
Phatrdraft1638
Predicted protein (548 aa)
       
  0.840
Phatr51283
Predicted protein (328 aa)
       
  0.747
Phatr13520
Predicted protein (127 aa)
       
  0.735
Phatr49469
Predicted protein (522 aa)
     
  0.703
Phatr14572
Predicted protein (219 aa)
       
  0.669
Phatr17408
Predicted protein (1303 aa)
     
  0.601
Phatr50326
Predicted protein (998 aa)
     
 
  0.543
Phatr9319
Predicted protein (96 aa)
     
  0.486
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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