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STRINGSTRING
Phatr15031 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15031" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15031Predicted protein; Belongs to the PI3/PI4-kinase family (118 aa)    
Predicted Functional Partners:
Phatr31423
Predicted protein (357 aa)
     
 
  0.923
Phatr49312
Predicted protein (1592 aa)
     
 
  0.918
Phatr46058
Formin like protein (2015 aa)
     
 
  0.855
Phatr11720
Predicted protein (69 aa)
     
 
  0.820
Phatr9342
Predicted protein (382 aa)
     
   
  0.787
Phatr36572
Autophagy-related protein 9; Involved in autophagy and cytoplasm to vacuole transport (Cvt) vesicle formation. Plays a key role in the organization of the preautophagosomal structure/phagophore assembly site (PAS), the nucleating site for formation of the sequestering vesicle (955 aa)
     
 
  0.784
Phatr43913
Autophagy protein 5; Involved in autophagic vesicle formation (330 aa)
     
 
  0.781
Phatr41667
Autophagy-related protein 3 (302 aa)
     
   
  0.778
Phatr50253
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy (557 aa)
     
   
  0.778
Phatr50303
Autophagy-related protein; Belongs to the ATG8 family (124 aa)
       
 
  0.770
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
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