• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Phatr15032 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15032" - GrpE protein homolog in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15032GrpE protein homolog; Essential component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner (157 aa)    
Predicted Functional Partners:
Phatr44351
Predicted protein (510 aa)
     
 
  0.940
Phatr50480
Predicted protein (514 aa)
   
 
  0.857
Hsp70_1
Predicted protein; Belongs to the heat shock protein 70 family (673 aa)
   
 
  0.857
Phatrdraft218
Predicted protein (125 aa)
     
 
  0.802
Phatr8096
Predicted protein (67 aa)
   
 
  0.802
Phatr44606
Predicted protein (130 aa)
     
 
  0.798
Phatr3171
Predicted protein (220 aa)
     
 
  0.793
Phatr8363
Predicted protein (84 aa)
     
   
  0.782
Phatr45826
Predicted protein (238 aa)
       
 
  0.750
IscU
Iron-sulfur cluster assembly protein; Scaffold protein for the de novo synthesis of iron- sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins (160 aa)
     
   
  0.727
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: P. tricornutum, Phaeodactylum tricornutum
Server load: low (11%) [HD]