STRINGSTRING
Phatr15233 protein (Phaeodactylum tricornutum) - STRING interaction network
"Phatr15233" - Predicted protein in Phaeodactylum tricornutum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Phatr15233Predicted protein (151 aa)    
Predicted Functional Partners:
Phatr46543
Predicted protein (532 aa)
       
  0.901
Phatr50048
Predicted protein (225 aa)
       
  0.836
Phatr8840
Predicted protein (93 aa)
       
  0.835
Phatr42998
Predicted protein (642 aa)
 
     
  0.835
Phatr7848
Predicted protein (135 aa)
       
  0.833
Phatr8518
Predicted protein (66 aa)
       
  0.824
Phatr10583
Predicted protein (94 aa)
       
  0.823
Phatr10494
Predicted protein (98 aa)
       
  0.823
Phatr50326
Predicted protein (998 aa)
     
 
  0.815
Phatr5588
Predicted protein (156 aa)
         
0.804
Your Current Organism:
Phaeodactylum tricornutum
NCBI taxonomy Id: 2850
Other names: Bacillariophyceae, Bacillariophycidae, Naviculales, P. tricornutum, Phaeodactylaceae, Phaeodactylum, Phaeodactylum tricornutum, Raphid, pennate diatoms
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